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alevin-fry

  • Description

    is a tool for the efficient processing of single-cell data based on RAD files produced by alevin.

  • Usage

    To list all executables provided by alevin-fry, run: $ biogrids-list alevinfry Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install alevinfry Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    D. He, M. Zakeri, H. Sarkar, C. Soneson, A. Srivastava, and R. Patro. 2022. Alevin-fry unlocks rapid, accurate and memory-frugal quantification of single-cell RNA-seq data. Nature methods. 19(3): 316-322.


    • *Full citation information available through

  • Keywords

    scRNA-Seq Analysis

  • Default Versions

    Linux 64:  0.8.1 (7.0 MB)
    OS X INTEL:  0.8.1 (3.9 MB)

  • Other Versions

      Linux 64:

      0.7.0 (8.0 MB)

    • OS X INTEL:

      0.7.0 (5.0 MB)
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