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Supported Applications

deSALT

  • Description

    De Bruijn graph-based Spliced Aligner for Long Transcriptome reads

  • Usage

    To list all executables provided by deSALT, run: $ biogrids-list desalt Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install desalt Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    B. Liu, Y. Liu, J. Li, H. Guo, T. Zang, and Y. Wang. 2019. deSALT: fast and accurate long transcriptomic read alignment with de Bruijn graph-based index. Genome biology. 20(1): 274.


    • *Full citation information available through

  • Keywords

    Genome Assembly

  • Default Versions

    Linux 64:  1.5.6 (5.2 MB)
    OS X INTEL:  1.5.6 (1.9 MB)

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