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hichip-peaks

  • Description

    A package that can be used to find enriched peak regions from HiChIP datasets that can then be used as an input to available loop calling tools or to do differential peak analysis.

  • Usage

    To list all executables provided by hichip-peaks, run: $ biogrids-list hichip-peaks Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install hichip-peaks Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    C. Shi, M. Rattray, and G. Orozco. 2020. HiChIP-Peaks: a HiChIP peak calling algorithm. Bioinformatics (Oxford, England). 36(12): 3625-3631.


    • *Full citation information available through

  • Keywords

    ChIP-Sequencing

  • Default Versions

    Linux 64:  0.1.2 (529.3 MB)
    OS X INTEL:  0.1.2 (485.0 MB)

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