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Mash

  • Description

    is a fast sequence distance estimator that uses the MinHash algorithm and is designed to work with genomes and metagenomes in the form of assemblies or reads.

  • Usage

    To list all executables provided by Mash, run: $ biogrids-list mash Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install mash Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    B. D. Ondov, T. J. Treangen, P. Melsted, A. B. Mallonee, N. H. Bergman, S. Koren, and A. M. Phillippy. 2016. Mash: fast genome and metagenome distance estimation using MinHash. Genome Biol.. 17(1): 132.


    • *Full citation information available through

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