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Supported Applications

MetaPhlAn

  • Description

    Metagenomic Phylogenetic Analysis

  • Usage

    To list all executables provided by MetaPhlAn, run: $ biogrids-list metaphlan Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install metaphlan Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    A. Blanco-Míguez, F. Beghini, F. Cumbo, L. J. McIver, K. N. Thompson, M. Zolfo, P. Manghi, L. Dubois, K. D. Huang, A. M. Thomas, W. A. Nickols, G. Piccinno, E. Piperni, M. Punčochář, M. Valles-Colomer, A. Tett, F. Giordano, R. Davies, J. Wolf, S. E. Berry, T. D. Spector, E. A. Franzosa, E. Pasolli, F. Asnicar, C. Huttenhower, and N. Segata. 2023. Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4. Nature biotechnology. 41(11): 1633-1644.


    • *Full citation information available through

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