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Supported Applications

shark

  • Description

    Mapping-free filtering of useless RNA-Seq reads

  • Usage

    To list all executables provided by shark, run: $ biogrids-list shark Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install shark Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    L. Denti, Y. Pirola, M. Previtali, T. Ceccato, G. D. Vedova, R. Rizzi, and P. Bonizzoni. 2021. Shark: fishing relevant reads in an RNA-Seq sample. Bioinformatics (Oxford, England). 37(4): 464-472.


    • *Full citation information available through

  • Keywords

    RNA-Seq Analysis

  • Default Versions

    Linux 64:  1.2.0 (12.4 MB)
    OS X INTEL:  1.2.0 (1.3 MB)

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