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Supported Applications

SNP-sites

  • Description

    rapidly extracts SNPs from a multi-FASTA alignment.

  • Usage

    To list all executables provided by SNP-sites, run: $ biogrids-list snp-sites Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install snp-sites Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    A. J. Page, B. Taylor, A. J. Delaney, J. Soares, T. Seemann, J. A. Keane, and S. R. Harris. 2016. SNP-sites: rapid efficient extraction of SNPs from multi-FASTA alignments. Microbial genomics. 2(4): e000056.


    • *Full citation information available through

  • Keywords

    Variant Analysis

  • Default Versions

    Linux 64:  2.5.1 (157.5 KB)
    OS X INTEL:  2.5.1 (137.9 KB)

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