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Supported Applications

tensorQTL

  • Description

    a GPU-enabled QTL mapper, achieving ~200-300 fold faster cis- and trans-QTL mapping compared to CPU-based implementations.

  • Usage

    To list all executables provided by tensorQTL, run: $ biogrids-list tensorqtl Copy to clipboard
  • Usage Notes

    tensorQTL in BioGrids provides the following aliases programs:

    python.tensorqtl

    jupyter.tensorqtl

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install tensorqtl Copy to clipboard Available operating systems: Linux 64
  • Primary Citation*

    A. Taylor-Weiner, F. Aguet, N. J. Haradhvala, S. Gosai, S. Anand, J. Kim, K. Ardlie, E. M. V. Allen, and G. Getz. 2019. Scaling computational genomics to millions of individuals with GPUs. Genome biology. 20(1): 228.


    • *Full citation information available through

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