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Supported Applications

UShER

  • Description

    a program that rapidly places new samples onto an existing phylogeny using maximum parsimony. It is particularly helpful in understanding the relationships of newly sequenced SARS-CoV-2 genomes with each other and with previously sequenced genomes in a global phylogeny.

  • Usage

    To list all executables provided by UShER, run: $ biogrids-list usher Copy to clipboard
  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install usher Copy to clipboard Available operating systems: Linux 64, OS X INTEL
  • Citation Note

    Please cite the website:

    https://github.com/yatisht/usher

  • Keywords

    Phylogenomics

  • Default Versions

    Linux 64:  0.3.5 (533.4 MB)
    OS X INTEL:  0.3.5 (410.4 MB)

  • Other Versions

      Linux 64:

      0.2.0 (505.9 MB)
    • OS X INTEL:

      0.2.0 (456.0 MB)
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