3d0f1ad4bda864a281973a2d7097853e1eb7b423
workshops.md
| ... | ... | @@ -67,8 +67,21 @@ Download then uncompress: |
| 67 | 67 | ``` |
| 68 | 68 | curl -kLO https://biogrids.org/wiki/downloads/biogrids_workshop.tar.gz |
| 69 | 69 | tar zxf biogrids_workshop.tar.gz |
| 70 | +cd biogrids_workshop |
|
| 71 | +./runMOV10.sh ./raw_fastq/ENCODE_MOV10.fq |
|
| 70 | 72 | ``` |
| 71 | 73 | |
| 72 | -Some download tools may uncompress for you. |
|
| 74 | +View results with IGV: |
|
| 75 | +``` |
|
| 76 | +igv |
|
| 77 | +``` |
|
| 78 | + |
|
| 79 | +Within IGV: |
|
| 80 | +1: Genomes / Load Genome from File... (chr1_MOV10.fa) |
|
| 81 | +2: File / Load from file... (chr1_MOV10.gtf) |
|
| 82 | +3: File / Load from file... ( .bam file) |
|
| 83 | + |
|
| 84 | + |
|
| 85 | + |
|
| 73 | 86 | |
| 74 | 87 | --- |