workshops
Installing Software
- Installation: Overview
- Downloads
- Installation: 'Site' installation
- Installation: MacOS GUI
- Installation: CLI Installer
- Available Packages
Using the BioGrids Environment
- Getting Started with BioGrids
- Overriding Software Versions
- BioGrids environment: Capsules
- BioGrids environment: Legacy
- BioGrids MacOS GUI : Usage
- BioGrids Package Manager : Usage
Getting Help
Support for Site Administrators
- Preparing Workstations to run the Software
- Managing your Installation
- Administrator Software Version Overrides
- Admins Mailing List
Hardware Support Notes
BioGrids Workshops
Learn how to use the BioGrids Installer with practical science applications.
To attend a workshop register for a BioGrids account and download the BioGrids Installer software.
| OSX GUI | OSX CLI | Linux |
|---|---|---|
| Biogrids_Installer-1.0.694.dmg | biogrids-1.0.694-Darwin.tgz | biogrids-1.0.694-Linux.tgz |
| cell4 | cell5 | cell6 |
BioGrids Installer CLI:
OSX: biogrids-1.0.694-Darwin.tgz
Linux : biogrids-1.0.694-Linux.tgz
BioGrids Installer GUI (OSX Only):
Biogrids_Installer-1.0.694.dmg
Complete workshop data files and scripts:
Using BioGrids for RNA-Seq on AWS and Your Laptop
May 15, 2019 - 10:30am | TMEC 106 | Register Here
USING BIOGRIDS FOR RNA-SEQ ON AWS AND YOUR LAPTOP
May 15, 2019 at 10:30am TMEC 106 James Vincent
Bioinformatics Software Specialist
Harvard Medical School, SBGrid/BioGrids
Full details
Dr. James Vincent from the BioGrids team at Harvard Medical School will provide a one hour tutorial on the use of AWS and BioGrids to complete an RNA-Seq workflow.
Attendees will learn the basics of starting AWS compute resources, installing software using the BioGrids Installer, running a simple RNA-Seq workflow and transferring results between AWS resources and a local machine.
The workshop will focus on practical computing aspects of running an RNA-Seq workflow and not the science behind RNA-Seq.