(Sequence Alignment/Map) a generic format for storing large nucleotide sequence alignments that provides various utilities for manipulating alignments, including sorting, merging, indexing and generating alignments in a per-position format.
Fast gene regulatory network analysis for single-cell data. Infer candidate regulatory relationships and score their activity from RNA and chromatin-accessibility data. Built in Rust, available through Python, and runs on CPUs.
Scalable gVCF merging and joint variant calling for population sequencing projects
a tool that helps redistributable software libraries to support CUDA applications for Linux.
a new kind of genome browser that runs on your desktop.
SIMD partial order alignment tool/library.
a cross-platform ultrafast comprehensive toolkit for FASTA/Q processing.
